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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015821798.1_cds_XP_016500875.1_14666
CDS Infomation

[gene=LOC107819293] [db_xref=GeneID:107819293] [protein=probable sphingolipid transporter spinster homolog 2] [partial=5'] [protein_id=XP_016500875.1] [location=join(<1271..1375,1472..1574,1641..1703,3422..3476,3614..3711,3900..3976,4255..4368,7923..8042,8446..8574,9827..9905,10032..10159)] [gbkey=CDS]
Sequence

TTTCTGCATGCTAATTGCCCTTCTTGTCAGAAAACAGCATGGCTGGGAATATTTTACATG
TGCATCCCAACTGGGATTGCTGTTGGCTATGTATATGGCGGATTGGTTGGAAGTCATCTT
GATTGGCGCTGGGCATTCCGGATAGAGGCATTGCTGATGCTTCCTTTTGCAATTTTAGGT
TTTGTGATGAAACCATTGCAATTGAAAGGGTTCTCGCACACCGGTTCACAAAATCCAGTG
ACTTCTGCGCAAACTTCTTGCCCAGAAGCAGTTGCTTCAACTAGTATTGATGGTTCGTAC
CCAATAAGAAATGATTCCAAGGATGATTCAAAAAGTGCACCCAGAATTTTGAATCAGTTG
ACAAGATTTTGGAAGGATATGAAGGCGCTTTTGCTTGACAAGGTCTACGTTGTGAATGTC
CTAGGATACATAGCATATAATTTTGTAATAGGTGCTTATTCATACTGGGGACCAAAGGCT
GGCTATTACATATACCATATGAACAATGCAGATCTGATGTTTGGAGGTATTACTATCGTA
TGTGGAATATTTGGAACCTTAGCAGGAGGCTTTGTTCTGGATCGAATGACTTCCACAATA
TCCAATGCCTTTAAGCTTCTTTCAGTGGCAACATTTTTTGGAGCGATATTTTGCTTTGCT
GCCTTTTGTTTTAAGAGCTTGTATGCCTTCATTGCTCTTTTTGCAATTGGAGAACTGCTT
GTATTTGCGACGCAGGGCCCTGTAAATTATGTCTGTCTGCATTGTGTCAAACCAAGTTTG
AGACCATTGTCTATGGCTATGTCCACTGTTTCGATTCACATATTTGGTGATGTGCCTTCC
TCTCCTCTGGTGGGGGTTCTCCAGGATCACATTAACAATTGGAGGGCTACTGCTCTAATC
CTGACATCAGTACTGTTTCTAGCCGCTGGAATATGGTTTATAGGTATCTTTCTTCATAGT
GTTGATAGATATAATGAAGAAAATGAGCATCAAGTTAGTATTGCTGATAGATCAAACACA
ATTCCACTTCTTGAGGAGAAATCTGCTGAAACAAGTCCAAGTCTCTGCTGA

Peptide Sequence

PEP ID

XP_016500875.1
PEP Infomation

PREDICTED: probable sphingolipid transporter spinster homolog 2, partial [Nicotiana tabacum]
Sequence

FLHANCPSCQKTAWLGIFYMCIPTGIAVGYVYGGLVGSHLDWRWAFRIEALLMLPFAILG
FVMKPLQLKGFSHTGSQNPVTSAQTSCPEAVASTSIDGSYPIRNDSKDDSKSAPRILNQL
TRFWKDMKALLLDKVYVVNVLGYIAYNFVIGAYSYWGPKAGYYIYHMNNADLMFGGITIV
CGIFGTLAGGFVLDRMTSTISNAFKLLSVATFFGAIFCFAAFCFKSLYAFIALFAIGELL
VFATQGPVNYVCLHCVKPSLRPLSMAMSTVSIHIFGDVPSSPLVGVLQDHINNWRATALI
LTSVLFLAAGIWFIGIFLHSVDRYNEENEHQVSIADRSNTIPLLEEKSAETSPSLC

Transcript Sequence

Gene sequence data has not been registered.